Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944790.1_cds_XP_016487513.1_78237
CDS Infomation

[gene=LOC107807606] [db_xref=GeneID:107807606] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 isoform X2] [protein_id=XP_016487513.1] [location=complement(join(158911..159149,159407..159617,159759..160054,160140..161418))] [gbkey=CDS]
Sequence

ATGATCACTTGTAATCAAAATCTGCAATATCTTCTTATTAACATTCTTGTTCTTTATGCT
TTCTACTTTGGACTTTGCATAGGAATATGTAACATTACCAGCACTCAATATCTAAGAGAT
CCAGCAACTTTATGGTGTCCTGGTAACATCTTCAAGTTGGGATTTTTCAATCCTCAAAAT
AGCTCGTATCGATACGTTGGTATCTGGTATAACTTCTCTGAAACAACTGTAGTTTGGGTG
GCTAATAGAGACAAGCCTTTGAAAGATTCTTCTGGTGTTGTTAAGATATCTGAGGATGGA
AATCTTGTTGTTATGAATGGAGATAAACAAACTCTTTGGTCATCAAATATTTCCTCAACT
TCAAACACTACAAATTCAACTGCTCAGCTCCAAGGTGGGAATCTTGTTTTACTTGACAAC
TCGAATGGGAGCATAATATGGCAAAGTTACCAACATCCTTCTGATACATTCTTGCCCAAA
ATGAAAATACCTATTAACTCTGAAAAGACAAGGGAGAAAACAGGGTTGAGATCTTGGAAA
AGCCCTTTGGATCCAAATTTCGGTGACTTTTCGAGTAGCATTACCACGATCCTTCCTCAG
CTTTTTATTTGGAAAGGGAAGTATCCTCTCTGGAGAAGTGGTCAATGGAATGGTCAGATA
TTCATTGGAGTAAAGAATATGCGATCCGTGCATACCGGTGGATACAATGTTGTAGATGAT
GAAGAGGGAACTGTTTATCTTACTGGTCTTGCTGATAGAAAGGAAGCCGTGAGATTCACA
TTGGAGCCGAATGGGAACTTGGTTCAATCAAATTGGGATGAGAATGAGAGGAATTGGAAG
ATCCCTTGGTTAGCTATCAGCGATGATTGTGATGTCTATGGAACTTGTGGTCCATTTGGT
TGTTGCAATTCATTGGATTCACCAATTTGTTCATGTTTGAGAGGTTTTGATCCAAAGAGT
AGAGAAGAATGGGAGAAAGGAAATTGGAGTAGTGGTTGTGCGAGGAGGAAACCTTTGCAA
TGTGAAGAAAAGAACAAAACAAGTAAAGAAGATGGATTTGTGAAGATGGAATTCATGAAA
GTGCCTGATTTTGCAGAATGGTTACCACCTAAGATGGAAGATGAATGCAGAAGCCAATGC
TTGAAAAACTTTTCTTGCTTAGCCTATGCATTTGACGCGGGGATAGGCTGTATGTCATGG
AGTAGAAGCTTGATTGACATTCAGGAATTACAACGCGCTGGCACAACTCTTTACATTCGT
GTGGCATATTCTGAACTTGATCATCCCAGAGTGATCAGACTAGTCGCAGTTCTAGTGATC
GTATCTTTTTTAATTGTTTGCGTTGGTGTGTTTCTTTGCTTGTTTTGGATATCAAGGCGA
AGAAGTAAAATATGGTTTCAGTTTAAAAGAAACCATCAGTTGCATGGAAAGAAGATCTCT
TTGGAAGAAAATATTACTACCAAAGTTGATTTGGATGATTTATCAATGTTCAAGTTTGAA
GTGCTTGCAATGTCCACAGACCAGTTTCATGAGAATAATAAGCTTGGACAAGGTGGTTTT
GGTCCGGTATACAAGGGGATATTAGCAGATGGGAAAGAAATAGCAGTCAAGAGGCTTTCA
ACTGCCTCAGGACAAGGGATGAAAGAGTTCATGAATGAAGTGTTGCTGATATCTACAGTC
CAACATAGAAACCTTGTTAAATTATTGGGATGTTGCATAGAAAAAGAGGAGAAGATGTTG
ATCTATGAGTACTTGCCAAATAAAAGCTTGGATGTCTTTCTCTTTGATCCAACACATAAA
AGAATCTTGGATTTGAGCAAACGCCTCCACATTATCGAAGGGATTGGGCGAGGATTACTT
TATCTACACAGAGATTCAAGAATAAAGATAATCCACAGAGATCTAAAGCCAAGTAATATT
TTGCTAGATAATGATTTCAATCCAAAGATTTCAGACTTTGGCATGGCTAGAATTTTCAAA
TGCAACCAAGATCAAGCAGAGACAAGAAAAGTTGCAGGAACCTAG

Peptide Sequence

PEP ID

XP_016487513.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 isoform X2 [Nicotiana tabacum]
Sequence

MITCNQNLQYLLINILVLYAFYFGLCIGICNITSTQYLRDPATLWCPGNIFKLGFFNPQN
SSYRYVGIWYNFSETTVVWVANRDKPLKDSSGVVKISEDGNLVVMNGDKQTLWSSNISST
SNTTNSTAQLQGGNLVLLDNSNGSIIWQSYQHPSDTFLPKMKIPINSEKTREKTGLRSWK
SPLDPNFGDFSSSITTILPQLFIWKGKYPLWRSGQWNGQIFIGVKNMRSVHTGGYNVVDD
EEGTVYLTGLADRKEAVRFTLEPNGNLVQSNWDENERNWKIPWLAISDDCDVYGTCGPFG
CCNSLDSPICSCLRGFDPKSREEWEKGNWSSGCARRKPLQCEEKNKTSKEDGFVKMEFMK
VPDFAEWLPPKMEDECRSQCLKNFSCLAYAFDAGIGCMSWSRSLIDIQELQRAGTTLYIR
VAYSELDHPRVIRLVAVLVIVSFLIVCVGVFLCLFWISRRRSKIWFQFKRNHQLHGKKIS
LEENITTKVDLDDLSMFKFEVLAMSTDQFHENNKLGQGGFGPVYKGILADGKEIAVKRLS
TASGQGMKEFMNEVLLISTVQHRNLVKLLGCCIEKEEKMLIYEYLPNKSLDVFLFDPTHK
RILDLSKRLHIIEGIGRGLLYLHRDSRIKIIHRDLKPSNILLDNDFNPKISDFGMARIFK
CNQDQAETRKVAGT

Transcript Sequence

Gene sequence data has not been registered.